PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G41720.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot. pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41720.3 11Arabidopsis thaliana080799990 (0)_
AT2G41720.2 11Arabidopsis thaliana067599990 (0)M
AT5G02860.1 11Arabidopsis thaliana4E-6363223470 (0)C
Os07g11280.1 7Oryza sativa067558780 (0)_
Os07g11280.2 7Oryza sativa067558780 (0)_
Os03g06910.1 7Oryza sativa5E-6249228470 (0)M
v1_GRMZM2G158452_P01 4a53Zea mays077957761 (1)C
Zm00001eb325040_P002 agpv5Zea mays077957760 (0)C
Zm00001eb325040_P001 agpv5Zea mays077957760 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC3(3) Clathrin(4) DUF1884(2) Mtf2(4) PPR(16) PPR_1(14) PPR_2(17) PPR_3(11) P
TargetP: Cytoplasm (Class 3 C0.239; M0.128; S0.064; _0.759)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 822 aa (-cTP 805)
Molecular Weight 92.41 kDA(-cTP )
PI 9.01(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help