PPDB

The Plant Proteome Database

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AT2G41475.1   Embryo-specific protein 3%2C (ATS3)

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62200.1 11Arabidopsis thaliana5E-521545165120 (46)S
AT5G62210.1 11Arabidopsis thaliana4E-3513743620 (0)S
AT5G07190.2 11Arabidopsis thaliana4E-27125425911 (6)_
Os01g07780.1 7Oryza sativa9E-3817941560 (0)C
Os05g07890.1 7Oryza sativa4E-3013339604 (4)S
Zm00001eb336790_P001 agpv5Zea mays2E-3312447650 (0)S
GRMZM2G061932_P01 3.21Zea mays2E-33124476513 (7)S
v1_GRMZM2G061932_P01 4a53Zea mays2E-33124476512 (12)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATS3(1) PLAT(1)
TargetP: Secreted (Class 2 C0.092; M0.093; S0.819; _0.005)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 179 aa (-cTP 122)
Molecular Weight 19.95 kDA(-cTP )
PI 9.06(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1507Detail        [A. thaliana] wild-type
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1600Detail        [A. thaliana]  
1615Detail       Natural Senescence leaf [A. thaliana]  
1620Detail        [A. thaliana] m48
1682Detail        [A. thaliana] t1-t2xt2-t1/T1strepII
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2210Detail       leaf [A. thaliana] total leaf tissue Clp P5 strepII st28
2211Detail       leaf [A. thaliana] total leaf tissue Clp P5 Trapst 12
2214Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2216Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2225Detail       leaf [A. thaliana] total leaf tissue Clp P3 trap
2226Detail       leaf [A. thaliana] total leaf tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2263Detail       leaf [A. thaliana] stroma Clp Clp C1 trap
2266Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21533090(plasmodesmata-crude)
21173025(root proteome)

Comparative Proteomics Data


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