PPDB

 The Plant Proteome Database

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AT2G41430.1   dehydration-induced protein (ERD15)
Lab Annot. ERD15 (EARLY RESPONSIVE TO DEHYDRATION 15)
Mapman: 20.2.3 stress.abiotic.drought/salt
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41430.2 11Arabidopsis thaliana3E-12016310010051 (21)M
AT2G41430.5 11Arabidopsis thaliana3E-12016310010043 (13)M
AT2G41430.4 11Arabidopsis thaliana3E-12016310010051 (21)M
Os03g23010.3 7Oryza sativa2E-2016238500 (0)S
Os03g23010.2 7Oryza sativa2E-2016238500 (0)S
Os03g23010.4 7Oryza sativa9E-175162760 (0)S
GRMZM2G181551_P04 3.21Zea mays6E-2515539500 (0)S
GRMZM2G181551_P02 3.21Zea mays6E-2515539500 (0)S
Zm00001eb400880_P001 agpv5Zea mays6E-2515539500 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PAM2(2)
TargetP: Mitochondria (Class 5 C0.053; M0.521; S0.102; _0.420)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 163 aa (-cTP 143)
Molecular Weight 18.41 kDA(-cTP )
PI 4.51(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2284Detail        [A. thaliana] Clp C1 WT
2285Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help