PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G41340.1   RNA polymerase II fifth largest subunit%2C D

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41340.2 11Arabidopsis thaliana7E-12818197980 (0)_
AT2G41340.3 11Arabidopsis thaliana3E-1271771001000 (0)_
AT3G57080.1 11Arabidopsis thaliana1E-11122170830 (0)_
Os12g04510.1 7Oryza sativa9E-6420946670 (0)C
Os11g04730.1 7Oryza sativa1E-6320945660 (0)_
Os01g59140.1 7Oryza sativa3E-3819238620 (0)_
Zm00001eb093130_P001 agpv5Zea mays8E-6320247690 (0)_
GRMZM2G162697_P02 3.21Zea mays8E-6320247690 (0)_
Zm00001eb079110_P002 agpv5Zea mays2E-3720038570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNA_pol_Rpb5_C(1) RNA_pol_Rpb5_N(1)
TargetP: Cytoplasm (Class 2 C0.060; M0.101; S0.149; _0.906)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 218 aa (-cTP 203)
Molecular Weight 24.90 kDA(-cTP )
PI 8.84(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help