PPDB

The Plant Proteome Database

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AT2G41300.1   strictosidine synthase-like 1

Lab Annot. strictosidine synthase
Mapman: 16.4.1 secondary metabolism.N misc.alkaloid-like
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G57010.1 11Arabidopsis thaliana4E-16631070820 (0)S
AT3G57020.1 11Arabidopsis thaliana2E-158312678041 (35)S
AT3G57020.2 11Arabidopsis thaliana2E-147312657740 (35)S
Os03g53950.1 7Oryza sativa7E-77320406120 (20)M
Os03g15710.1 7Oryza sativa1E-6931540560 (0)M
Os11g04660.1 7Oryza sativa3E-6930839560 (0)S
v1_GRMZM2G177928_P01 4a53Zea mays2E-8732142633 (2)S
GRMZM2G177928_P01 3.21Zea mays2E-8732142636 (6)S
Zm00001eb057400_P001 agpv5Zea mays2E-8732142630 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Reg_prop(3) SGL(2) Str_synth(1)
TargetP: Secreted (Class 1 C0.031; M0.010; S0.923; _0.097)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 394 aa (-cTP 368)
Molecular Weight 44.39 kDA(-cTP )
PI 6.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
1091Detail        [A. thaliana] R4Strep Complemented

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help