PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G41290.1   strictosidine synthase-like 2

Lab Annot. strictosidine synthase (SS)
Mapman: 16.4.1 secondary metabolism.N misc.alkaloid-like
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G57030.1 11Arabidopsis thaliana4E-109381456210 (10)S
AT5G22020.1 11Arabidopsis thaliana6E-8233144590 (0)S
AT5G22020.3 11Arabidopsis thaliana6E-8233144590 (0)S
Os11g04660.1 7Oryza sativa4E-9335044620 (0)S
Os12g04424.1 7Oryza sativa3E-9235942610 (0)_
Os12g04424.2 7Oryza sativa4E-9135043620 (0)S
v1_GRMZM2G055467_P01 4a53Zea mays1E-8934743632 (2)S
GRMZM2G055467_P01 3.21Zea mays1E-8934743630 (0)S
v1_GRMZM2G177928_P01 4a53Zea mays1E-8034242583 (2)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NHL(2) Reg_prop(2) SGL(2) Str_synth(1)
TargetP: Secreted (Class 2 C0.036; M0.043; S0.836; _0.185)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 376 aa (-cTP 287)
Molecular Weight 41.48 kDA(-cTP )
PI 6.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to flower)
19200160(flower-stage 12)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help