PPDB

The Plant Proteome Database

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AT2G41130.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot. bHLH protein family
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G56770.1 11Arabidopsis thaliana4E-9825565741 (1)_
AT1G68810.1 11Arabidopsis thaliana1E-4120444690 (0)_
AT3G25710.1 11Arabidopsis thaliana1E-3221838640 (0)_
Os03g15440.1 7Oryza sativa3E-3921141630 (0)_
Os09g24490.1 7Oryza sativa5E-3416545640 (0)_
Os08g33590.1 7Oryza sativa2E-2921741580 (0)_
Zm00001eb011370_P001 agpv5Zea mays3E-4019544660 (0)_
Zm00001eb041610_P001 agpv5Zea mays2E-3913650730 (0)_
Zm00001eb099390_P001 agpv5Zea mays6E-3816344630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: COG7(1) FhuF(1) HLH(1)
TargetP: Cytoplasm (Class 2 C0.028; M0.114; S0.077; _0.898)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 253 aa (-cTP 188)
Molecular Weight 27.98 kDA(-cTP )
PI 7.68(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

12938931(Total chloroplast envelope)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help