PPDB

PPDB	The Plant Proteome Database

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AT2G41080.1 pentatricopeptide (PPR) repeat protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G23330.1 11 Arabidopsis thaliana 2E-155 611 38 58 0 (0) _
AT2G22070.1 11 Arabidopsis thaliana 4E-151 639 38 58 0 (0) _
AT5G16860.1 11 Arabidopsis thaliana 3E-150 617 39 58 0 (0) _
Os03g60200.1 7 Oryza sativa 0 630 52 70 0 (0) _
Os02g01610.1 7 Oryza sativa 5E-157 588 38 58 0 (0) _
Os02g01610.2 7 Oryza sativa 5E-157 588 38 58 0 (0) _
GRMZM5G849971_P01 3.21 Zea mays 0 632 53 70 0 (0) _
Zm00001eb052880_P001 agpv5 Zea mays 0 632 53 70 0 (0) _
v1_GRMZM2G478561_P01 4a53 Zea mays 0 540 55 72 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(1) PPR(12) PPR_1(8) PPR_2(11) PPR_3(8) PPR_long(3) TPR_14(4) TPR_1
TargetP:	Chloroplast (Class 5 C0.243; M0.223; S0.014; _0.100)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	650 aa (-cTP 593)
Molecular Weight	72.82 kDA(-cTP 66.48)
PI	8.37(-cTP 7.61)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data