PPDB

 The Plant Proteome Database

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AT2G41050.1   PQ-loop repeat family protein / transmembrane family protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41050.3 11Arabidopsis thaliana03761001000 (0)S
AT2G41050.5 11Arabidopsis thaliana0350991000 (0)S
AT2G41050.4 11Arabidopsis thaliana03131001000 (0)S
Os01g16170.2 7Oryza sativa2E-9738748610 (0)M
Os01g16170.1 7Oryza sativa5E-9738948610 (0)M
Os01g16170.3 7Oryza sativa3E-5933942560 (0)M
Zm00001eb128150_P001 agpv5Zea mays6E-10439147610 (0)M
Zm00001eb128150_P004 agpv5Zea mays1E-10239247610 (0)M
Zm00001eb128150_P003 agpv5Zea mays1E-10239247610 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ER_lumen_recept(3) PQ-loop(2)
TargetP: Secreted (Class 5 C0.018; M0.033; S0.664; _0.466)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 376 aa (-cTP 342)
Molecular Weight 41.81 kDA(-cTP )
PI 8.18(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help