PPDB

PPDB	The Plant Proteome Database

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AT2G40830.1 RING-H2 finger C1A

Lab Annot.

RING-H2 finger C1A
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G40830.4 11 Arabidopsis thaliana 0 328 100 100 0 (0) M
AT2G40830.3 11 Arabidopsis thaliana 0 328 100 100 0 (0) M
AT2G40830.2 11 Arabidopsis thaliana 0 328 100 100 0 (0) M
Os03g22830.2 7 Oryza sativa 2E-85 286 50 65 0 (0) M
Os03g22830.1 7 Oryza sativa 2E-85 286 50 65 0 (0) M
Os01g58780.1 7 Oryza sativa 1E-69 342 38 52 0 (0) M
v1_GRMZM2G164358_P02 4a53 Zea mays 7E-77 296 50 62 0 (0) M
v1_GRMZM2G164358_P01 4a53 Zea mays 7E-77 296 50 62 0 (0) M
GRMZM2G164358_P02 3.21 Zea mays 7E-77 296 50 62 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CxC4(1) DUF5318(2) DZR(3) DZR_2(2) FANCL_C(2) HypA(2) Prok-RING_1(3) Prok-RING_4
TargetP:	Mitochondria (Class 3 C0.069; M0.711; S0.011; _0.278)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	328 aa (-cTP 316)
Molecular Weight	36.58 kDA(-cTP )
PI	7.18(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16287169(Cell Wall proteome)

Comparative Proteomics Data