PPDB

PPDB	The Plant Proteome Database

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AT2G40770.1 RING-finger%2C DEAD-like helicase%2C PHD and SNF2 domain-containing protein

Lab Annot.

SNF2 domain-containing protein / helicase domain-containing protein
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G40770.3 11 Arabidopsis thaliana 0 1664 100 100 0 (0) M
AT2G40770.2 11 Arabidopsis thaliana 0 1664 100 100 0 (0) M
AT1G61140.3 11 Arabidopsis thaliana 8E-32 566 25 40 0 (0) _
Os07g48270.1 7 Oryza sativa 2E-54 180 58 73 0 (0) _
Os02g32570.2 7 Oryza sativa 4E-30 295 29 44 0 (0) _
Os02g32570.1 7 Oryza sativa 1E-29 300 29 44 0 (0) _
Zm00001eb330720_P001 agpv5 Zea mays 0 1646 49 64 0 (0) M
Zm00001eb330720_P003 agpv5 Zea mays 0 1646 49 64 0 (0) M
Zm00001eb330720_P002 agpv5 Zea mays 0 881 45 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2616(3) Helicase_C(1) PHD(1) SNF2_N(1) TPR_1(1) TPR_10(1) TPR_2(1) zf-C3HC4(1
TargetP:	Mitochondria (Class 4 C0.076; M0.675; S0.034; _0.286)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1664 aa (-cTP 1635)
Molecular Weight	188.07 kDA(-cTP )
PI	6.17(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data