PPDB

PPDB	The Plant Proteome Database

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AT2G40720.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G21300.1 11 Arabidopsis thaliana 7E-140 785 32 53 0 (0) C
AT1G11290.1 11 Arabidopsis thaliana 2E-134 663 34 55 1 (1) C
AT4G18750.1 11 Arabidopsis thaliana 4E-134 671 34 56 0 (0) C
Os04g39410.1 7 Oryza sativa 2E-156 817 34 54 0 (0) M
Os09g07780.1 7 Oryza sativa 4E-139 791 32 51 0 (0) M
Os01g25270.1 7 Oryza sativa 3E-138 749 33 52 0 (0) M
AC203841.3_FGP002 3.21 Zea mays 2E-143 761 33 54 0 (0) C
v1_AC203841.3_FGP002 4a53 Zea mays 2E-143 761 33 54 0 (0) C
Zm00001eb424590_P001 agpv5 Zea mays 3E-143 761 33 54 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1475(2) DYW_deaminase(1) PPR(18) PPR_1(15) PPR_2(16) PPR_3(10) PPR_long(4) TP
TargetP:	Cytoplasm (Class 5 C0.020; M0.390; S0.076; _0.532)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	860 aa (-cTP 791)
Molecular Weight	95.39 kDA(-cTP )
PI	6.37(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data