PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G40700.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DEAD box RNA helicase (RH17)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G65900.1 11 Arabidopsis thaliana 4E-85 551 35 51 0 (0) _
AT3G18600.1 11 Arabidopsis thaliana 7E-84 572 34 49 13 (10) _
AT5G54910.1 11 Arabidopsis thaliana 1E-58 520 31 48 1 (1) _
Os05g01990.1 7 Oryza sativa 0 556 61 79 0 (0) _
Os05g01990.2 7 Oryza sativa 0 418 59 78 0 (0) _
Os03g58810.1 7 Oryza sativa 5E-84 586 32 51 0 (0) C
Zm00001eb348990_P001 agpv5 Zea mays 0 561 61 78 0 (0) _
Zm00001eb212700_P001 agpv5 Zea mays 8E-82 601 32 50 0 (0) C
v1_GRMZM2G099914_P01 4a53 Zea mays 8E-82 601 32 50 21 (21) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_11(3) DEAD(1) DUF4217(1) Helicase_C(1) ResIII(1)
TargetP:	Cytoplasm (Class 5 C0.290; M0.335; S0.029; _0.375)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	610 aa (-cTP 592)
Molecular Weight	68.34 kDA(-cTP )
PI	9.41(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data