PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G40650.1   PRP38 family protein

Lab Annot. PRP38 protein
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G16780.1 11Arabidopsis thaliana2E-0711542597 (7)_
AT5G16780.2 11Arabidopsis thaliana2E-0711542590 (0)_
AT5G16780.3 11Arabidopsis thaliana2E-0711542590 (0)_
Os09g01630.2 7Oryza sativa1E-11523274850 (0)_
Os09g01630.1 7Oryza sativa3E-11322875860 (0)_
Zm00001eb095730_P001 agpv5Zea mays2E-11625371810 (0)_
GRMZM2G042807_P01 3.21Zea mays2E-11625371811 (1)_
v1_GRMZM2G042807_P01 4a53Zea mays2E-11625371817 (7)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PRP38(1) PRP38_assoc(2) SART-1(2)
TargetP: Cytoplasm (Class 3 C0.120; M0.301; S0.050; _0.752)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 355 aa (-cTP 342)
Molecular Weight 43.17 kDA(-cTP )
PI 7.72(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help