PPDB

The Plant Proteome Database

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AT2G40610.1   expansin A8

Lab Annot. expansin A8
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G05290.1 11Arabidopsis thaliana3E-13524971830 (0)S
AT2G03090.1 11Arabidopsis thaliana4E-13123174860 (0)S
AT1G69530.2 11Arabidopsis thaliana1E-128226758718 (9)S
Os05g39990.1 7Oryza sativa1E-13024672840 (0)M
Os01g60770.1 7Oryza sativa3E-12822875850 (0)S
Os02g51040.1 7Oryza sativa2E-11722968820 (0)S
GRMZM2G361064_P01 3.21Zea mays9E-13222677881 (1)S
v1_GRMZM2G361064_P02 4a53Zea mays9E-13222677887 (7)S
v1_GRMZM2G339122_P01 4a53Zea mays1E-12722875860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DPBB_1(1) DUF5417(1) Expansin_C(1)
TargetP: Secreted (Class 4 C0.011; M0.051; S0.809; _0.511)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 253 aa (-cTP 189)
Molecular Weight 27.26 kDA(-cTP )
PI 6.48(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help