PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G40470.1   LOB domain-containing protein 15

Lab Annot.
Mapman: 27.3.37 RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40470.2 11Arabidopsis thaliana3E-1471991001000 (0)C
AT2G30340.1 11Arabidopsis thaliana2E-7816969810 (0)_
AT2G30340.2 11Arabidopsis thaliana1E-7515969820 (0)_
Os01g60960.1 7Oryza sativa1E-7626251620 (0)_
Os05g07270.1 7Oryza sativa4E-6712180900 (0)M
Os05g27980.1 7Oryza sativa8E-4610366800 (0)_
Zm00001eb149360_P002 agpv5Zea mays3E-7317864730 (0)_
GRMZM2G092517_P01 3.21Zea mays3E-7317864730 (0)_
v1_GRMZM2G092517_P01 4a53Zea mays3E-7317864730 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2195(1) Fez1(1) LOB(1) Mito_fiss_reg(1)
TargetP: Cytoplasm (Class 2 C0.215; M0.077; S0.008; _0.836)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 224 aa (-cTP 194)
Molecular Weight 24.66 kDA(-cTP )
PI 8.94(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19452453(14-3-3-interacting proteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help