PPDB

PPDB	The Plant Proteome Database

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AT2G40400.1 DUF399 family protein%2C putative (DUF399 and DUF3411)

Lab Annot.

Reticulate family member - RER5 (DUF399 and DUF3411)
Mapman: 35.2 not assigned.unknown

Curated Location

envelope-inner-integral

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G40400.2 11 Arabidopsis thaliana 0 735 100 100 1 (0) C
AT2G40400.3 11 Arabidopsis thaliana 0 650 99 100 0 (0) C
AT3G56140.1 11 Arabidopsis thaliana 0 687 81 89 18 (13) C
Os01g61120.1 7 Oryza sativa 0 679 63 78 0 (0) C
Os05g39680.1 7 Oryza sativa 0 696 60 76 8 (8) _
Os01g72710.1 7 Oryza sativa 5E-59 291 39 60 4 (4) C
v1_GRMZM2G034120_P01 4a53 Zea mays 0 688 59 75 38 (38) C
Zm00001eb149270_P001 agpv5 Zea mays 0 679 59 73 0 (0) C
Zm00001eb149270_P002 agpv5 Zea mays 0 682 62 77 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AATF-Che1(2) Cofac_haem_bdg(1) DrsE_2(1) RETICULATA-like(1)
TargetP:	Chloroplast (Class 2 C0.830; M0.102; S0.000; _0.034)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:	67
Length	735 aa (-cTP 725) (-lTP 642)
Molecular Weight	80.70 kDA(-cTP 79.69)(-lTP 70.99)
PI	8.31(-cTP 8.09)(-lTP 5.789)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data