PPDB

The Plant Proteome Database

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AT2G40400.1   DUF399 family protein%2C putative (DUF399 and DUF3411)

Lab Annot. Reticulate family member - RER5 (DUF399 and DUF3411)
Mapman: 35.2 not assigned.unknown
Curated Location envelope-inner-integral
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40400.2 11Arabidopsis thaliana07351001001 (1)C
AT2G40400.3 11Arabidopsis thaliana0650991000 (0)C
AT3G56140.1 11Arabidopsis thaliana0687818917 (17)C
Os01g61120.1 7Oryza sativa067963780 (0)C
Os05g39680.1 7Oryza sativa069660768 (8)_
Os01g72710.1 7Oryza sativa5E-5929139604 (4)C
v1_GRMZM2G034120_P01 4a53Zea mays0688597538 (38)C
Zm00001eb149270_P001 agpv5Zea mays067959730 (0)C
Zm00001eb149270_P002 agpv5Zea mays068262770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AATF-Che1(2) Cofac_haem_bdg(1) DrsE_2(1) RETICULATA-like(1)
TargetP: Chloroplast (Class 2 C0.830; M0.102; S0.000; _0.034)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position: 67
Length 735 aa (-cTP 725) (-lTP 642)
Molecular Weight 80.70 kDA(-cTP 79.69)(-lTP 70.99)
PI 8.31(-cTP 8.09)(-lTP 5.789)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data


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