PPDB

 The Plant Proteome Database

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AT2G40390.1   neuronal PAS domain protein
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64190.2 11Arabidopsis thaliana3E-17650450690 (0)C
AT5G64190.1 11Arabidopsis thaliana4E-17649851690 (0)C
AT2G15020.1 11Arabidopsis thaliana8E-4141427470 (0)_
Os01g07130.1 7Oryza sativa049452690 (0)C
Os07g12800.2 7Oryza sativa2E-15550144640 (0)C
Os07g12800.1 7Oryza sativa2E-15550144640 (0)C
GRMZM2G083328_P02 3.21Zea mays1E-17350549670 (0)C
v1_GRMZM2G083328_P02 4a53Zea mays1E-17350549670 (0)C
GRMZM2G083328_P01 3.21Zea mays6E-3921936570 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SLC35F(1)
TargetP: Chloroplast (Class 3 C0.719; M0.022; S0.004; _0.194)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 496 aa (-cTP 394)
Molecular Weight 56.87 kDA(-cTP 45.57)
PI 8.85(-cTP 8.90)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help