PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G40360.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40360.2 11Arabidopsis thaliana075397970 (0)_
AT5G01770.5 11Arabidopsis thaliana5E-0722124420 (0)_
AT5G01770.3 11Arabidopsis thaliana5E-0722124420 (0)_
Os07g25440.1 7Oryza sativa067961780 (0)_
Os07g25440.2 7Oryza sativa064762780 (0)_
Zm00001eb131370_P002 agpv5Zea mays068361770 (0)_
Zm00001eb131370_P001 agpv5Zea mays068361770 (0)_
GRMZM2G048067_P03 3.21Zea mays2E-0622325430 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(3) BOP1NT(1) WD40(6)
TargetP: Cytoplasm (Class 3 C0.274; M0.090; S0.101; _0.850)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 753 aa (-cTP 720)
Molecular Weight 85.38 kDA(-cTP )
PI 5.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help