PPDB

The Plant Proteome Database

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AT2G40350.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40350.2 11Arabidopsis thaliana1E-1131551001000 (0)_
AT2G40340.3 11Arabidopsis thaliana1E-7312586910 (0)_
AT2G40340.1 11Arabidopsis thaliana3E-7312586910 (0)_
Os01g07120.1 7Oryza sativa1E-3911955720 (0)_
Os01g07120.2 7Oryza sativa1E-3911955720 (0)_
Os08g45110.1 7Oryza sativa3E-358469820 (0)_
Zm00001eb336270_P001 agpv5Zea mays5E-4011959730 (0)_
v1_GRMZM2G156737_P01 4a53Zea mays6E-329569800 (0)_
Zm00001eb175640_P001 agpv5Zea mays6E-329569800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1)
TargetP: Cytoplasm (Class 5 C0.031; M0.607; S0.026; _0.692)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 157 aa (-cTP 105)
Molecular Weight 17.79 kDA(-cTP )
PI 10.02(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help