PPDB

The Plant Proteome Database

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AT2G40220.1   Integrase-type DNA-binding superfamily protein

Lab Annot. ABI4- ABA insensitive 4
Mapman: 27.3 RNA.regulation of transcription
Curated Location nucleus (Pubmed: 19482916 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G57600.1 11Arabidopsis thaliana4E-278264780 (0)_
AT1G75490.1 11Arabidopsis thaliana2E-259656690 (0)_
AT2G40340.4 11Arabidopsis thaliana8E-2410351640 (0)_
Os05g28350.1 7Oryza sativa3E-267184910 (0)_
Os03g07830.1 7Oryza sativa2E-256873800 (0)_
Os08g45110.1 7Oryza sativa2E-249253730 (0)_
Zm00001eb286280_P001 agpv5Zea mays1E-289374810 (0)_
GRMZM2G093595_P01 3.21Zea mays1E-289374810 (0)_
v1_GRMZM2G093595_P01 4a53Zea mays1E-289374810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1) DUF4637(1)
TargetP: Cytoplasm (Class 4 C0.440; M0.052; S0.025; _0.735)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 328 aa (-cTP 261)
Molecular Weight 35.67 kDA(-cTP )
PI 6.19(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help