PPDB

The Plant Proteome Database

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AT2G40200.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G56770.1 11Arabidopsis thaliana2E-2913446671 (1)_
AT3G25710.1 11Arabidopsis thaliana2E-2515640630 (0)_
AT1G68810.1 11Arabidopsis thaliana2E-2419236610 (0)_
Os01g06640.1 7Oryza sativa4E-2818239590 (0)_
Os01g06640.2 7Oryza sativa4E-2818239590 (0)_
Os03g15440.1 7Oryza sativa1E-2415742650 (0)_
GRMZM2G369629_P02 3.21Zea mays3E-2919234560 (0)_
v1_GRMZM2G369629_P02 4a53Zea mays3E-2919234560 (0)_
Zm00001eb099390_P001 agpv5Zea mays9E-2915839550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1)
TargetP: Cytoplasm (Class 3 C0.293; M0.050; S0.049; _0.707)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 254 aa (-cTP 200)
Molecular Weight 28.41 kDA(-cTP )
PI 6.15(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help