PPDB

The Plant Proteome Database

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AT2G40170.1   Stress induced protein

Lab Annot. group 1 LEA geneuration.
Mapman: 17.1.3 hormone metabolism.abscisic acid.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G51810.2 11Arabidopsis thaliana7E-3711263730 (0)_
AT3G51810.1 11Arabidopsis thaliana2E-256575905 (3)_
Os05g28210.1 7Oryza sativa2E-399569860 (0)_
Os01g06630.1 7Oryza sativa2E-074753720 (0)_
AC233879.1_FGP002 3.21Zea mays2E-388974860 (0)_
Zm00001eb286170_P001 agpv5Zea mays2E-388974860 (0)_
v1_AC233879.1_FGP002 4a53Zea mays2E-388974860 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_5(2)
TargetP: Cytoplasm (Class 2 C0.176; M0.139; S0.050; _0.841)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 92 aa (-cTP 35)
Molecular Weight 9.93 kDA(-cTP )
PI 6.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2249Detail       seedlings [A. thaliana] total tissue gfs9
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data


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