PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G40140.1 zinc finger (CCCH-type) family protein

Lab Annot.

Mapman: 27.3.12 RNA.regulation of transcription.C3H zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G40140.2 11 Arabidopsis thaliana 0 597 100 100 0 (0) _
AT3G55980.1 11 Arabidopsis thaliana 0 615 68 79 0 (0) _
AT3G55980.2 11 Arabidopsis thaliana 0 615 68 79 0 (0) C
Os03g49170.3 7 Oryza sativa 1E-123 659 39 50 0 (0) _
Os03g49170.1 7 Oryza sativa 2E-123 659 39 50 0 (0) _
Os05g03760.1 7 Oryza sativa 7E-121 570 41 54 0 (0) _
v1_GRMZM2G180979_P01 4a53 Zea mays 6E-131 659 39 50 1 (1) _
GRMZM2G180979_P01 3.21 Zea mays 6E-131 659 39 50 0 (0) _
Zm00001eb053870_P001 agpv5 Zea mays 6E-131 659 39 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ank(2) Ank_2(1) Ank_3(2) Ank_4(2) Ank_5(2) Torus(1) zf-CCCH(2) zf-CCCH_2(3) zf-C
TargetP:	Cytoplasm (Class 3 C0.219; M0.096; S0.178; _0.647)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	597 aa (-cTP 576)
Molecular Weight	66.15 kDA(-cTP )
PI	6.66(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data