PPDB

 The Plant Proteome Database

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AT2G40010.1   Ribosomal protein L10 family protein
Lab Annot. 60S acidic ribosomal protein P0 (RPP0A)
Mapman: 29.2.1.2.2.80 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G09200.1 11Arabidopsis thaliana02768897523 (375)_
AT3G11250.1 11Arabidopsis thaliana02768897115 (94)_
AT3G09200.2 11Arabidopsis thaliana3E-1512767685298 (206)_
Os08g03640.1 7Oryza sativa5E-171320768872 (72)_
Os11g04070.1 7Oryza sativa2E-16231974867 (7)_
Os12g03880.1 7Oryza sativa5E-162278799219 (19)_
Zm00001eb261840_P001 agpv5Zea mays8E-15728677900 (0)_
GRMZM2G066460_P01 3.21Zea mays8E-1572867790299 (195)_
v1_GRMZM2G066460_P01 4a53Zea mays8E-1572867790228 (227)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: GHMP_kinases_C(1) Maf_N(1) Ribosomal_60s(1) Ribosomal_L10(1) RL10P_insert(1) Yuk
TargetP: Secreted (Class 4 C0.008; M0.036; S0.664; _0.461)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 317 aa (-cTP 258)
Molecular Weight 33.67 kDA(-cTP )
PI 5.19(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
245Detail       leaf [A. thaliana] total leaf tissue wild-type
324Detail       leaf [A. thaliana] cell wall enriched wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1547Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1613Detail       Natural Senescence leaf [A. thaliana]  
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1833Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2240Detail       seedlings [A. thaliana] total tissue gfs9
2241Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2257Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 17934214(cytosolic ribosome)
18814325(cotyledons)
20118269(developing seeds)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
19888209(leaves)
20061580(chloroplast envelope (inner+outer))
21166475(cytosolic-fractions-crude)
22430844(Golgi-cell-culture)

Comparative Proteomics Data

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