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AT2G39940.1
RNI-like superfamily protein
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| Lab Annot. |
COI1 (CORONATINE INSENSITIVE 1); ubiquitin-protein ligase
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX |
| Curated Location |
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
F-box-like(1) F-box_5(1) LRR_6(4) Transp_inhibit(4) |
| TargetP: |
Cytoplasm (Class 1 C0.039; M0.082; S0.084; _0.937) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
592 aa (-cTP 507) |
| Molecular Weight |
67.66 kDA(-cTP ) |
| PI |
6.06(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 1396 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpt1xclpt2 (rep. 2) |
| 1423 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 3) |
| 1424 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 1) |
| 1425 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 2) |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 2013 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wt |
| 2014 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2016 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2296 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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19525416(leaf (wt and clpr4-1 mutant))
19816138(rosette leaves)
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Comparative Proteomics Data
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