PPDB

 The Plant Proteome Database

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AT2G39550.1   Prenyltransferase family protein
Lab Annot.
Mapman: 16.1.1 secondary metabolism.isoprenoids.non-mevalonate pathway
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G12210.1 11Arabidopsis thaliana3E-3523733503 (3)_
AT5G12210.2 11Arabidopsis thaliana3E-3523733503 (3)_
AT3G12070.1 11Arabidopsis thaliana4E-3533629470 (0)_
Os01g05680.1 7Oryza sativa3E-9220364760 (0)_
Os08g40140.1 7Oryza sativa7E-4230932490 (0)_
Os08g40140.2 7Oryza sativa3E-3528632490 (0)_
Zm00001eb124350_P002 agpv5Zea mays2E-14734063750 (0)_
Zm00001eb124350_P001 agpv5Zea mays1E-14136858690 (0)_
Zm00001eb124350_P003 agpv5Zea mays3E-8520062740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Prenyltrans(5) SQHop_cyclase_N(3)
TargetP: Cytoplasm (Class 2 C0.251; M0.025; S0.122; _0.914)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 375 aa (-cTP 343)
Molecular Weight 41.47 kDA(-cTP )
PI 4.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help