PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G39480.1 P-glycoprotein 6

Lab Annot.

P-glycoprotein 6
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G55320.1 11 Arabidopsis thaliana 0 1409 90 95 0 (0) _
AT2G39480.2 11 Arabidopsis thaliana 0 1227 100 100 0 (0) _
AT2G47000.1 11 Arabidopsis thaliana 0 1340 36 57 5 (5) _
Os03g17180.1 7 Oryza sativa 0 1416 77 87 14 (14) _
Os01g74470.1 7 Oryza sativa 0 1427 76 84 7 (7) _
Os04g54930.1 7 Oryza sativa 4E-168 571 45 67 0 (0) _
Zm00001eb139690_P002 agpv5 Zea mays 0 970 75 83 0 (0) _
GRMZM2G401769_P01 3.21 Zea mays 0 709 76 84 1 (1) _
GRMZM2G049351_P01 3.21 Zea mays 0 464 84 92 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_15(2) AAA_16(2) AAA_21(3) AAA_22(2) AAA_23(2) AAA_29(2) AAA_30(2) AAA_7(2) A
TargetP:	Cytoplasm (Class 5 C0.191; M0.320; S0.247; _0.409)
Predotar:
Subcel. Location:
TM-HMM prediction:	13 TMs
Aramemnon:	12 TMs
TAT position:
Length	1407 aa (-cTP 1387)
Molecular Weight	155.87 kDA(-cTP )
PI	5.74(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
20843791(DRM-enriched plasmamembrane)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data