PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G39280.1 Ypt/Rab-GAP domain of gyp1p superfamily protein

Lab Annot.

Ypt/Rab-GAP domain protein
Mapman: 30.5 signalling.G-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G39280.2 11 Arabidopsis thaliana 0 777 95 95 1 (1) _
AT3G55020.1 11 Arabidopsis thaliana 0 735 78 87 4 (0) C
AT3G55020.3 11 Arabidopsis thaliana 0 730 79 87 0 (0) C
Os01g61860.1 7 Oryza sativa 0 736 62 75 13 (13) M
Os05g38950.2 7 Oryza sativa 0 741 58 70 20 (20) _
Os05g38950.1 7 Oryza sativa 0 741 58 70 20 (20) _
Zm00001eb148790_P001 agpv5 Zea mays 0 734 61 72 0 (0) M
GRMZM2G096470_P01 3.21 Zea mays 0 734 61 72 4 (3) M
v1_GRMZM2G096470_P01 4a53 Zea mays 0 734 61 72 2 (2) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cupin_8(1) Peptidase_M16(1) RabGAP-TBC(2) YfdX(1)
TargetP:	Cytoplasm (Class 3 C0.082; M0.333; S0.027; _0.748)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	749 aa (-cTP 708)
Molecular Weight	84.62 kDA(-cTP )
PI	5.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1484	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data