PPDB

The Plant Proteome Database

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AT2G39250.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
TAIR curated location: nucleolus & nucleus7919989,15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G39250.2 11Arabidopsis thaliana1E-1632171001000 (0)_
AT3G54990.1 11Arabidopsis thaliana2E-10134959701 (1)_
AT3G54990.2 11Arabidopsis thaliana1E-6524159691 (1)_
Os03g60430.1 7Oryza sativa6E-4511471850 (0)_
Os03g60430.2 7Oryza sativa8E-4511471850 (0)_
Os04g55560.2 7Oryza sativa2E-3819952620 (0)_
GRMZM5G862109_P03 3.21Zea mays9E-4611870810 (0)_
GRMZM5G862109_P01 3.21Zea mays1E-4411870810 (0)_
Zm00001eb062460_P001 agpv5Zea mays1E-4411870810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1) Mito_fiss_reg(2) PRIMA1(1) VIR_N(1)
TargetP: Cytoplasm (Class 2 C0.189; M0.044; S0.028; _0.906)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 325 aa (-cTP 243)
Molecular Weight 36.44 kDA(-cTP )
PI 9.02(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help