PPDB

PPDB	The Plant Proteome Database

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AT2G39100.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G39100.2 11 Arabidopsis thaliana 0 273 100 100 0 (0) C
AT3G05250.1 11 Arabidopsis thaliana 8E-08 273 20 39 1 (1) _
Os01g72480.1 7 Oryza sativa 2E-06 85 30 51 0 (0) C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_IE-1(1) DUF1272(1) DZR(1) Prok-RING_1(2) Prok-RING_4(2) PWI(1) Rad50_zn_h
TargetP:	Chloroplast (Class 3 C0.716; M0.255; S0.007; _0.093)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	296 aa (-cTP 254)
Molecular Weight	34.42 kDA(-cTP 30.05)
PI	9.85(-cTP 9.74)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data