PPDB

PPDB	The Plant Proteome Database

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AT2G39090.1 tetratricopeptide repeat (TPR)-containing protein

Lab Annot.

Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G39090.2 11 Arabidopsis thaliana 0 511 99 99 0 (0) _
AT3G48150.1 11 Arabidopsis thaliana 5E-10 262 23 47 0 (0) M
AT3G48150.2 11 Arabidopsis thaliana 7E-10 236 23 47 0 (0) M
Os05g05720.1 7 Oryza sativa 0 537 62 77 0 (0) _
Os05g05720.2 7 Oryza sativa 0 407 67 80 0 (0) M
Os02g43920.1 7 Oryza sativa 1E-10 260 23 46 0 (0) M
GRMZM2G089296_P02 3.21 Zea mays 0 539 61 77 0 (0) _
Zm00001eb418180_P002 agpv5 Zea mays 0 539 61 77 0 (0) _
Zm00001eb418180_P003 agpv5 Zea mays 0 524 59 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(6) BTAD(4) Coatomer_E(3) HNF_C(2) PknG_TPR(3) TOM20_plant(2) TPR_1(6) TPR
TargetP:	Cytoplasm (Class 1 C0.051; M0.050; S0.047; _0.957)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	558 aa (-cTP 524)
Molecular Weight	62.35 kDA(-cTP )
PI	6.34(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data