PPDB

The Plant Proteome Database

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AT2G38880.7   nuclear factor Y%2C subunit B1

Lab Annot. nuclear factor Y, subunit B1
Mapman: 27.3.15 RNA.regulation of transcription.CCAAT box binding factor family, HAP3
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38880.5 11Arabidopsis thaliana1E-9714198980 (0)_
AT2G38880.1 11Arabidopsis thaliana1E-9714198980 (0)_
AT2G38880.2 11Arabidopsis thaliana1E-9714198980 (0)_
Os05g38820.3 6Oryza sativa2E-62107839310 (10)_
Os05g38820.1 6Oryza sativa2E-62107839310 (10)_
Os05g38820.2 6Oryza sativa2E-62107839310 (10)_
v1_GRMZM2G064426_P01 4a53Zea mays4E-6511581916 (6)_
GRMZM2G064426_P01 3.21Zea mays4E-6511581914 (4)_
GRMZM2G064426_P02 3.21Zea mays2E-6311780894 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Bromo_TP(1) CBFD_NFYB_HMF(1) CENP-T_C(1) Histone(1)
TargetP: Cytoplasm (Class 3 C0.251; M0.077; S0.087; _0.848)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 139 aa (-cTP 134)
Molecular Weight 14.94 kDA(-cTP )
PI 4.95(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help