PPDB

The Plant Proteome Database

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AT2G38880.6   nuclear factor Y%2C subunit B1

Lab Annot. nuclear factor Y, subunit B1
Mapman: 27.3.15 RNA.regulation of transcription.CCAAT box binding factor family, HAP3
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38880.9 11Arabidopsis thaliana5E-1121531001000 (0)_
AT2G38880.10 11Arabidopsis thaliana5E-1121531001000 (0)_
AT2G38880.4 11Arabidopsis thaliana7E-791111001000 (0)_
Os05g38820.4 7Oryza sativa4E-5893889618 (18)_
Os05g38820.3 6Oryza sativa2E-5793879610 (10)_
Os05g38820.1 6Oryza sativa2E-5793879610 (10)_
GRMZM2G064426_P02 3.21Zea mays7E-599488964 (4)_
v1_GRMZM2G064426_P02 4a53Zea mays7E-599488966 (6)_
Zm00001eb351690_P003 agpv5Zea mays1E-589488960 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Bromo_TP(1) CBFD_NFYB_HMF(1) CENP-T_C(1) Histone(2)
TargetP: Cytoplasm (Class 3 C0.267; M0.069; S0.082; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 153 aa (-cTP 148)
Molecular Weight 16.90 kDA(-cTP )
PI 5.25(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help