PPDB

The Plant Proteome Database

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AT2G38870.1   Serine protease inhibitor%2C potato inhibitor I-type family protein

Lab Annot. Serine protease inhibitor (potato inhibitor I-type)
Mapman: 29.5.5.10.4* protein.degradation.serine protease.inhibitor.IG-i3
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38900.1 11Arabidopsis thaliana4E-217358710 (0)_
AT2G38900.2 11Arabidopsis thaliana5E-216361740 (0)S
AT5G43580.1 11Arabidopsis thaliana2E-157250631 (1)_
Os08g34258.1 7Oryza sativa2E-126446590 (0)S
Os08g34249.1 7Oryza sativa2E-126446590 (0)S
Os12g36210.1 7Oryza sativa8E-126746590 (0)_
Zm00001eb208560_P001 agpv5Zea mays8E-157042550 (0)_
GRMZM2G012928_P01 3.21Zea mays1E-106347600 (0)_
Zm00001eb267000_P001 agpv5Zea mays1E-106347600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: potato_inhibit(1)
TargetP: Cytoplasm (Class 2 C0.155; M0.203; S0.090; _0.823)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 70 aa (-cTP 45)
Molecular Weight 7.62 kDA(-cTP )
PI 6.14(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1356Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help