PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G38820.1   DNA-directed RNA polymerase subunit beta-beta protein%2C putative (DUF506)

Lab Annot. Protein of unknown function (DUF506)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38820.2 11Arabidopsis thaliana2E-1391901001000 (0)_
AT3G22970.1 11Arabidopsis thaliana5E-4620648630 (0)C
AT3G54550.1 11Arabidopsis thaliana8E-4119747650 (0)C
Os03g58230.1 7Oryza sativa1E-2719339530 (0)_
Os03g06680.1 7Oryza sativa2E-2216739540 (0)C
Os10g28210.1 7Oryza sativa3E-2216838540 (0)C
GRMZM2G030350_P01 3.21Zea mays3E-2816939540 (0)M
Zm00001eb301450_P001 agpv5Zea mays3E-2816939540 (0)M
v1_GRMZM2G030350_P01 4a53Zea mays3E-2816939540 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PDDEXK_6(1)
TargetP: Cytoplasm (Class 3 C0.271; M0.069; S0.012; _0.848)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 214 aa (-cTP 140)
Molecular Weight 23.58 kDA(-cTP )
PI 8.57(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help