PPDB

The Plant Proteome Database

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AT2G38780.1   cytochrome C oxidase subunit

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38780.4 11Arabidopsis thaliana04651001000 (0)C
AT2G38780.6 11Arabidopsis thaliana048895950 (0)C
AT2G38780.12 11Arabidopsis thaliana03601001000 (0)C
Os05g31680.1 7Oryza sativa4E-47228385512 (12)C
GRMZM2G104397_P01 3.21Zea mays1E-8332042614 (4)C
v1_GRMZM2G104397_P01 4a53Zea mays1E-8332042611 (1)C
Zm00001eb347150_P002 agpv5Zea mays6E-7628843610 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TPR_1(2) TPR_12(1) TPR_19(1) TPR_2(2) TPR_6(2) TPR_7(2) TPR_8(2)
TargetP: Chloroplast (Class 3 C0.776; M0.029; S0.007; _0.200)
Predotar:
Subcel. Location: Thylakoid membrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 465 aa (-cTP 372) (-lTP 343)
Molecular Weight 51.87 kDA(-cTP 41.65)(-lTP 38.46)
PI 8.54(-cTP 8.45)(-lTP 8.242)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help