PPDB

PPDB	The Plant Proteome Database

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AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Lab Annot.

Haloacid dehalogenase-like hydrolase (HAD)
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G56500.2 11 Arabidopsis thaliana 8E-12 213 27 49 0 (0) C
AT1G56500.1 11 Arabidopsis thaliana 8E-12 213 27 49 395 (375) C
AT4G39970.1 11 Arabidopsis thaliana 7E-10 226 26 42 424 (390) C
Os09g24230.1 7 Oryza sativa 3E-100 233 59 78 10 (10) _
Os10g41930.2 7 Oryza sativa 4E-99 236 58 78 7 (7) C
Os10g41930.1 7 Oryza sativa 1E-98 233 58 78 7 (7) C
Zm00001eb379130_P001 agpv5 Zea mays 3E-104 237 60 79 0 (0) _
v1_GRMZM2G475293_P01 4a53 Zea mays 3E-104 237 60 79 15 (14) _
v1_GRMZM2G475293_P02 4a53 Zea mays 3E-104 237 60 79 15 (14) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HAD(1) HAD_2(1) Hydrolase(2) Hydrolase_6(1) Hydrolase_like(1) NIF(1)
TargetP:	Cytoplasm (Class 2 C0.111; M0.057; S0.159; _0.852)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	244 aa (-cTP 229)
Molecular Weight	26.73 kDA(-cTP )
PI	4.84(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)
1447	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 3)
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1450	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data