PPDB

The Plant Proteome Database

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AT2G38730.1   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Lab Annot.
Mapman: 31.3.1 cell.cycle.peptidylprolyl isomerase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G21130.1 11Arabidopsis thaliana3E-66171597332 (28)_
AT3G56070.1 11Arabidopsis thaliana3E-651716071117 (96)_
AT3G56070.2 11Arabidopsis thaliana3E-651716071109 (88)_
Os03g59700.1 7Oryza sativa1E-11420476851 (1)C
Os09g39780.1 7Oryza sativa3E-63172577013 (13)S
Os09g39780.2 7Oryza sativa3E-63172577013 (13)S
Zm00001eb212200_P001 agpv5Zea mays2E-11720180860 (0)C
v1_GRMZM2G057329_P01 4a53Zea mays2E-117201808623 (23)C
GRMZM2G057329_P01 3.21Zea mays2E-117201808618 (13)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pro_isomerase(1)
TargetP: Cytoplasm (Class 5 C0.418; M0.089; S0.173; _0.546)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 199 aa (-cTP 191)
Molecular Weight 21.49 kDA(-cTP )
PI 8.47(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help