PPDB

 The Plant Proteome Database

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AT2G38695.1   Gag-Pol polyprotein/retrotransposon
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38695.3 11Arabidopsis thaliana9E-14726081810 (0)C
AT2G38695.4 11Arabidopsis thaliana9E-101140991000 (0)C
AT2G38695.2 11Arabidopsis thaliana9E-101140991000 (0)C
Os09g27070.1 7Oryza sativa9E-6215859740 (0)C
Os04g51140.2 7Oryza sativa5E-1013633510 (0)C
Os04g51140.1 7Oryza sativa8E-1011834550 (0)S
GRMZM2G075348_P03 3.21Zea mays1E-6417457740 (0)C
Zm00001eb314250_P001 agpv5Zea mays1E-6417457740 (0)C
GRMZM2G075348_P04 3.21Zea mays2E-6316359745 (5)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM:
TargetP: Chloroplast (Class 3 C0.880; M0.411; S0.008; _0.010)
Predotar:
Subcel. Location: Thylakoid membrane
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 212 aa (-cTP 151) (-lTP 148)
Molecular Weight 23.35 kDA(-cTP 16.60)(-lTP 16.32)
PI 9.78(-cTP 9.33)(-lTP 9.457)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help