PPDB

The Plant Proteome Database

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AT2G38560.1   transcript elongation factor IIS

Lab Annot. transcript elongation factor IIS
Mapman: 29.2.4 protein.synthesis.elongation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G42725.1 11Arabidopsis thaliana3E-3313053680 (0)_
AT4G18720.1 11Arabidopsis thaliana5E-2912951640 (0)_
AT5G42325.1 11Arabidopsis thaliana2E-2114640560 (0)_
Os03g60130.2 7Oryza sativa1E-13239455650 (0)_
Os03g60130.1 7Oryza sativa1E-13239455650 (0)_
Os07g12630.1 7Oryza sativa1E-11039447620 (0)_
Zm00001eb062210_P002 agpv5Zea mays2E-13139255680 (0)_
Zm00001eb440670_P002 agpv5Zea mays2E-13139255680 (0)_
Zm00001eb212040_P002 agpv5Zea mays5E-12338752660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CTNNBL(1) Med26(2) TFIIS_C(1) TFIIS_M(1)
TargetP: Cytoplasm (Class 2 C0.062; M0.058; S0.166; _0.893)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 378 aa (-cTP 326)
Molecular Weight 41.98 kDA(-cTP )
PI 9.08(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
20813957(SUMO proteome)

Comparative Proteomics Data


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