PPDB

The Plant Proteome Database

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AT2G38530.1   lipid transfer protein 2

Lab Annot. LTP2 (LIPID TRANSFER PROTEIN 2); lipid binding
Mapman: 11.6 lipid metabolism.lipid transfer proteins etc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38540.1 11Arabidopsis thaliana2E-531186881128 (126)S
AT3G51600.1 11Arabidopsis thaliana5E-42118557237 (37)S
AT2G15050.3 11Arabidopsis thaliana3E-3912256680 (0)S
Os12g02340.1 7Oryza sativa1E-239551660 (0)S
Os11g02424.2 7Oryza sativa1E-239551660 (0)S
Os12g02330.2 7Oryza sativa5E-239650640 (0)S
Zm00001eb406100_P001 agpv5Zea mays2E-199250660 (0)S
GRMZM2G101958_P01 3.21Zea mays2E-1992506660 (54)S
v1_GRMZM2G101958_P01 4a53Zea mays2E-1992506682 (81)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LTP_2(1) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 1 C0.006; M0.018; S0.970; _0.037)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 118 aa (-cTP 43)
Molecular Weight 11.94 kDA(-cTP )
PI 9.32(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(PlasmaMembrane-LOPIT-callus)
17293592(total seedlings û light and dark grown)
18998720(SA-induced secreted proteome (cell culture))
18796151(cell wall (hypocotyl))
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data


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