PPDB

The Plant Proteome Database

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AT2G38480.1   Uncharacterized protein family (UPF0497)

Lab Annot. Uncharacterised protein family (UPF0497)
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G36330.1 11Arabidopsis thaliana6E-1916331630 (0)C
AT5G62820.1 11Arabidopsis thaliana4E-1616434590 (0)_
AT5G40300.1 11Arabidopsis thaliana1E-1015230560 (0)_
Os05g27790.1 7Oryza sativa1E-5216149701 (1)_
Os03g60250.1 7Oryza sativa8E-4416547660 (0)_
Os03g18680.1 7Oryza sativa7E-3015642636 (6)_
GRMZM2G304108_P01 3.21Zea mays2E-5318945651 (1)_
v1_GRMZM2G304108_P01 4a53Zea mays2E-5318945651 (1)_
Zm00001eb286320_P001 agpv5Zea mays2E-5318945650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2975(2) DUF588(1) MARVEL(1)
TargetP: Cytoplasm (Class 2 C0.274; M0.018; S0.112; _0.904)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 188 aa (-cTP 172)
Molecular Weight 20.89 kDA(-cTP )
PI 6.29(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help