PPDB

PPDB	The Plant Proteome Database

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AT2G38410.1 ENTH/VHS/GAT family protein

Lab Annot.

VHS domain-containing protein / GAT domain-containing protein
Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G01760.1 11 Arabidopsis thaliana 1E-125 619 40 55 0 (0) C
AT4G32760.1 11 Arabidopsis thaliana 6E-92 607 36 50 104 (64) _
AT4G32760.2 11 Arabidopsis thaliana 2E-90 608 36 50 95 (55) _
Os05g27320.1 7 Oryza sativa 2E-130 512 47 62 0 (0) _
Os05g39760.1 7 Oryza sativa 2E-129 710 39 51 0 (0) M
Os05g27320.2 7 Oryza sativa 3E-126 529 45 60 0 (0) _
GRMZM2G127297_P01 3.21 Zea mays 1E-121 528 42 57 9 (0) M
v1_GRMZM2G127297_P01 4a53 Zea mays 1E-121 528 42 57 0 (0) M
Zm00001eb290360_P001 agpv5 Zea mays 1E-121 528 42 57 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ENTH(1) GAT(2) PAT1(1) VHS(1)
TargetP:	Cytoplasm (Class 4 C0.343; M0.021; S0.230; _0.670)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	671 aa (-cTP 666)
Molecular Weight	72.32 kDA(-cTP )
PI	5.50(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1494	Detail								leaf [A. thaliana]
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data