PPDB

 The Plant Proteome Database

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AT2G38210.1   putative PDX1-like protein 4
Lab Annot. ethylene-responsive protein
Mapman: 17.5.3 hormone metabolism.ethylene.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38230.1 11Arabidopsis thaliana5E-46789898343 (195)_
AT5G01410.1 11Arabidopsis thaliana2E-40789293260 (132)_
AT5G01410.2 11Arabidopsis thaliana2E-407892930 (0)_
Os07g01020.1 7Oryza sativa2E-3183757832 (32)_
Os10g01080.1 7Oryza sativa5E-3177798319 (19)_
Os11g48080.1 7Oryza sativa3E-3074788513 (13)_
Zm00001eb118250_P001 agpv5Zea mays2E-308274800 (0)_
GRMZM5G850015_P01 3.21Zea mays2E-3082748065 (23)_
Zm00001eb298350_P001 agpv5Zea mays2E-308275780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SOR_SNZ(1)
TargetP: Cytoplasm (Class 2 C0.147; M0.102; S0.090; _0.816)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 79 aa (-cTP 72)
Molecular Weight 8.14 kDA(-cTP )
PI 6.17(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1744Detail        [A. thaliana] Mep-6
1871Detail       Total leaf [A. thaliana] Stroma wild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2160Detail       leaf [A. thaliana] stroma Clp stromaP3-strepII 13
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2193Detail        [A. thaliana] total soluble P3-strepII 26

* For details about the exprimental sources click here.

Published Proteomics Data

 17151019(vacuole - suspension cell)
19888209(80S polysomal fraction)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help