PPDB

PPDB	The Plant Proteome Database

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AT2G38195.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G38220.2 11 Arabidopsis thaliana 0 401 97 98 0 (0) _
AT2G38220.1 11 Arabidopsis thaliana 0 404 96 97 0 (0) _
AT2G38195.2 11 Arabidopsis thaliana 0 313 99 100 0 (0) _
Os05g44550.1 7 Oryza sativa 1E-17 180 31 53 0 (0) S
Os06g14200.1 7 Oryza sativa 7E-11 68 38 66 0 (0) _
Os07g26490.1 7 Oryza sativa 1E-07 65 41 50 0 (0) _
GRMZM2G004023_P06 3.21 Zea mays 5E-09 135 28 46 0 (0) _
GRMZM2G004023_P05 3.21 Zea mays 5E-09 135 28 46 0 (0) _
v1_GRMZM2G004023_P01 4a53 Zea mays 5E-09 135 28 46 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Crystall_4(2) DUF4792(1) DUF4793(1) Prok-RING_4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) z
TargetP:	Cytoplasm (Class 1 C0.026; M0.073; S0.119; _0.934)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:
TAT position:
Length	399 aa (-cTP 328)
Molecular Weight	44.54 kDA(-cTP )
PI	6.44(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data