PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G38185.1 RING/U-box superfamily protein

Lab Annot.

Mapman: 27.3.12 RNA.regulation of transcription.C3H zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G38185.2 11 Arabidopsis thaliana 0 441 100 100 0 (0) _
AT2G38185.4 11 Arabidopsis thaliana 0 447 98 98 0 (0) _
AT2G38185.3 11 Arabidopsis thaliana 0 284 99 99 0 (0) S
Os05g44550.1 7 Oryza sativa 7E-18 314 26 41 0 (0) S
Os06g14200.1 7 Oryza sativa 1E-11 54 46 68 0 (0) _
Os07g26490.1 7 Oryza sativa 9E-10 101 29 43 0 (0) _
GRMZM2G004023_P06 3.21 Zea mays 3E-07 106 28 46 0 (0) _
GRMZM2G004023_P05 3.21 Zea mays 3E-07 106 28 46 0 (0) _
v1_GRMZM2G004023_P01 4a53 Zea mays 3E-07 106 28 46 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4792(1) DUF4793(1) Prok-RING_4(1) Rad50_zn_hook(1) zf-C3HC4(1) zf-C3HC4_2(1)
TargetP:	Cytoplasm (Class 3 C0.253; M0.053; S0.042; _0.800)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	5 TMs
TAT position:
Length	441 aa (-cTP 422)
Molecular Weight	49.06 kDA(-cTP )
PI	4.66(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data