PPDB

 The Plant Proteome Database

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AT2G38160.1   hypothetical protein
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38160.2 11Arabidopsis thaliana03141001004 (4)_
AT2G38160.3 11Arabidopsis thaliana032098980 (0)_
AT2G38160.6 11Arabidopsis thaliana032098980 (0)_
Os01g04880.1 7Oryza sativa5E-197757660 (0)_
Os01g04880.2 7Oryza sativa2E-0719029440 (0)_
Zm00001eb124690_P001 agpv5Zea mays5E-197757660 (0)_
Zm00001eb124690_P003 agpv5Zea mays7E-197757660 (0)_
Zm00001eb124690_P002 agpv5Zea mays7E-1924235480 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM:
TargetP: Cytoplasm (Class 3 C0.244; M0.069; S0.037; _0.653)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 314 aa (-cTP 255)
Molecular Weight 34.41 kDA(-cTP )
PI 10.40(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1933Detail       leaf [A. thaliana] chloroplast wild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

 19888209(80S polysomal fraction)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help