PPDB

 The Plant Proteome Database

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AT2G37720.1   TRICHOME BIREFRINGENCE-LIKE 15
Lab Annot. unknown protein - DUF231 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64020.1 11Arabidopsis thaliana040876850 (0)S
AT5G20680.6 11Arabidopsis thaliana2E-14135455700 (0)_
AT5G20680.2 11Arabidopsis thaliana8E-14135455700 (0)M
Os09g23360.1 7Oryza sativa3E-14535156720 (0)S
Os11g13800.3 7Oryza sativa1E-14335155700 (0)_
Os11g13800.1 7Oryza sativa6E-14335155700 (0)S
GRMZM2G094500_P01 3.21Zea mays3E-14135354690 (0)S
v1_GRMZM2G094500_P04 4a53Zea mays3E-14135355690 (0)_
GRMZM2G094500_P04 3.21Zea mays3E-14135355690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PC-Esterase(1) PMR5N(1)
TargetP: Cytoplasm (Class 5 C0.046; M0.160; S0.186; _0.316)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 482 aa (-cTP 472)
Molecular Weight 54.17 kDA(-cTP )
PI 9.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
343Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
738Detail        [A. thaliana]  
875Detail       leaf [A. thaliana] chloroplast stromawild-type
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1122Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1124Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1617Detail        [A. thaliana] m48
1832Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1937Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1983Detail       leaf [A. thaliana] plastid wild-type
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help